Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| potassium channel family protein | YT1_RS23680 | Not Available | Negative | 4972694 - 4973593 | 32165.2 |
| duf2254 domain-containing protein | YT1_RS23685 | Not Available | Negative | 4973578 - 4974963 | 49779.9 |
| cation:proton antiporter | YT1_RS23690 | Not Available | Negative | 4975097 - 4976329 | 42222.6 |
| pas domain s-box protein | YT1_RS23695 | Not Available | Negative | 4976360 - 4977841 | 54775.2 |
| acyl-coa dehydrogenase family protein | YT1_RS23700 | Not Available | Positive | 4977996 - 4979180 | 41905.9 |
| hypothetical protein | YT1_RS23705 | Not Available | Positive | 4979234 - 4979596 | 13376.2 |
| nuclear transport factor 2 family protein | YT1_RS23710 | Not Available | Positive | 4979600 - 4980136 | 19876.8 |
| aromatic ring-hydroxylating oxygenase subunit alpha | YT1_RS23715 | Not Available | Positive | 4980133 - 4981413 | 48391.0 |
| aromatic-ring-hydroxylating dioxygenase subunit beta | YT1_RS23720 | Not Available | Positive | 4981406 - 4981909 | 18902.5 |
| sdr family nad(p)-dependent oxidoreductase | YT1_RS23725 | Not Available | Positive | 4981919 - 4982677 | 25721.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


