Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | YT1_RS23485 | Not Available | Negative | 4931457 - 4932080 | 23089.4 |
| acyl-coa synthetase | YT1_RS23490 | Not Available | Negative | 4932077 - 4933627 | 55462.6 |
| acyl-coa dehydrogenase family protein | YT1_RS23495 | Not Available | Negative | 4933660 - 4934817 | 42282.3 |
| crotonase/enoyl-coa hydratase family protein | YT1_RS23500 | Not Available | Negative | 4934865 - 4935674 | 28611.1 |
| permease prefix domain 1-containing protein | YT1_RS23505 | Not Available | Negative | 4935820 - 4937160 | 48434.0 |
| padr family transcriptional regulator | YT1_RS23510 | Not Available | Negative | 4937160 - 4937516 | 13058.5 |
| hypothetical protein | YT1_RS23515 | Not Available | Negative | 4937731 - 4937982 | 8798.08 |
| hypothetical protein | YT1_RS23520 | Not Available | Negative | 4938076 - 4938501 | 14886.5 |
| duf2630 family protein | YT1_RS23525 | Not Available | Positive | 4938603 - 4938845 | 9394.69 |
| acyl transferase | YT1_RS23530 | Not Available | Positive | 4938879 - 4939388 | 17465.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


