Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| maoc family dehydratase | YT1_RS23440 | Not Available | Positive | 4922655 - 4923662 | 35450.0 |
| whib family transcriptional regulator | YT1_RS23445 | Not Available | Positive | 4923676 - 4923990 | 11715.9 |
| abc transporter permease | YT1_RS23450 | Not Available | Negative | 4924243 - 4925055 | 28053.9 |
| atp-binding cassette domain-containing protein | YT1_RS23455 | Not Available | Negative | 4925052 - 4925978 | 32652.1 |
| hypothetical protein | YT1_RS27380 | Not Available | Negative | 4925980 - 4926123 | 4929.84 |
| fmn-dependent nadh-azoreductase | YT1_RS23460 | Not Available | Negative | 4926389 - 4927033 | 23041.4 |
| caib/baif coa transferase family protein | YT1_RS23465 | Not Available | Negative | 4927144 - 4928361 | 43716.3 |
| tyrosine-protein phosphatase | YT1_RS23470 | Not Available | Negative | 4928358 - 4929131 | 27215.3 |
| acyl-coa dehydrogenase | YT1_RS23475 | Not Available | Negative | 4929221 - 4930285 | 37358.8 |
| acyl-coa dehydrogenase family protein | YT1_RS23480 | Not Available | Negative | 4930285 - 4931433 | 40810.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


