Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | YT1_RS03110 | Not Available | Positive | 433014 - 434480 | 51375.2 |
| diacylglycerol/lipid kinase family protein | YT1_RS03115 | Not Available | Positive | 434477 - 435835 | 47691.1 |
| mfs transporter | YT1_RS03120 | Not Available | Negative | 435799 - 437457 | 56627.0 |
| class ii glutamine amidotransferase | YT1_RS03125 | Not Available | Negative | 437561 - 438382 | 30473.2 |
| helix-turn-helix transcriptional regulator | YT1_RS03130 | Not Available | Negative | 438442 - 439199 | 25474.6 |
| slipin family protein | YT1_RS03135 | Not Available | Negative | 439196 - 440083 | 31839.8 |
| glutaredoxin domain-containing protein | YT1_RS03140 | Not Available | Positive | 440275 - 440649 | 13669.5 |
| class i sam-dependent methyltransferase | YT1_RS03145 | Not Available | Positive | 440649 - 441281 | 22907.9 |
| metal-sensitive transcriptional regulator | YT1_RS03150 | Not Available | Negative | 441363 - 441665 | 11003.3 |
| mbl fold metallo-hydrolase | YT1_RS03155 | Not Available | Positive | 441794 - 443173 | 48704.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


