Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | YT1_RS23190 | Not Available | Positive | 4864874 - 4865629 | 27711.0 |
| rok family protein | YT1_RS23195 | Not Available | Positive | 4865629 - 4866513 | 28343.2 |
| dienelactone hydrolase family protein | YT1_RS23200 | Not Available | Positive | 4866593 - 4867507 | 31431.9 |
| phosphotransferase family protein | YT1_RS23205 | Not Available | Positive | 4867577 - 4868722 | 41700.2 |
| hypothetical protein | YT1_RS23210 | Not Available | Positive | 4868719 - 4869876 | 43132.0 |
| aldehyde dehydrogenase | YT1_RS23215 | Not Available | Positive | 4869888 - 4871336 | 50810.4 |
| serine o-acetyltransferase epsc | YT1_RS23220 | Not Available | Negative | 4871442 - 4872020 | 20682.1 |
| cysteine synthase a | YT1_RS23225 | Not Available | Negative | 4872028 - 4872963 | 32942.6 |
| transposase | YT1_RS23230 | Not Available | Negative | 4873212 - 4874897 | 58992.7 |
| voc family protein | YT1_RS23235 | Not Available | Positive | 4875069 - 4875545 | 17308.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


