Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| terc family protein | YT1_RS23040 | Not Available | Positive | 4826453 - 4827517 | 39557.0 |
| tetr/acrr family transcriptional regulator | YT1_RS23045 | Not Available | Negative | 4827501 - 4828118 | 22801.9 |
| cytochrome p450 | YT1_RS23050 | Not Available | Positive | 4828211 - 4829560 | 50550.5 |
| fad/nad(p)-binding oxidoreductase | YT1_RS23055 | Not Available | Negative | 4829574 - 4830791 | 43996.7 |
| thiamine pyrophosphate-dependent enzyme | YT1_RS23060 | Not Available | Negative | 4831057 - 4833165 | 74534.8 |
| haas signaling domain-containing protein | YT1_RS23065 | Not Available | Positive | 4833294 - 4834268 | 34208.4 |
| hnh endonuclease family protein | YT1_RS23070 | Not Available | Negative | 4834275 - 4835006 | 26103.6 |
| beta-ketoacyl-acp synthase iii | YT1_RS23075 | Not Available | Negative | 4835006 - 4836028 | 35762.5 |
| duf4185 domain-containing protein | YT1_RS23080 | Not Available | Positive | 4836207 - 4837349 | 41007.4 |
| helix-turn-helix transcriptional regulator | YT1_RS23085 | Not Available | Positive | 4837380 - 4837987 | 22300.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


