Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| merr family transcriptional regulator | YT1_RS22990 | Not Available | Negative | 4818901 - 4819215 | 11304.3 |
| tigr03086 family metal-binding protein | YT1_RS22995 | Not Available | Positive | 4819652 - 4820269 | 21278.0 |
| pentapeptide repeat-containing protein | YT1_RS23000 | Not Available | Positive | 4820391 - 4821137 | 27080.2 |
| hypothetical protein | YT1_RS23005 | Not Available | Positive | 4821211 - 4821591 | 13580.8 |
| dienelactone hydrolase family protein | YT1_RS23010 | Not Available | Positive | 4821602 - 4822240 | 22535.8 |
| antar domain-containing protein | YT1_RS23015 | Not Available | Positive | 4822491 - 4822784 | 10781.6 |
| hypothetical protein | YT1_RS23020 | Not Available | Negative | 4822785 - 4824395 | 58800.6 |
| hypothetical protein | YT1_RS23025 | Not Available | Positive | 4824490 - 4824813 | 12194.5 |
| alpha/beta fold hydrolase | YT1_RS23030 | Not Available | Negative | 4824926 - 4825846 | 33079.3 |
| helix-turn-helix transcriptional regulator | YT1_RS23035 | Not Available | Negative | 4825914 - 4826234 | 11621.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


