Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | YT1_RS22940 | Not Available | Positive | 4809260 - 4809757 | 18314.7 |
| pha/phb synthase family protein | YT1_RS22945 | Not Available | Positive | 4810054 - 4811736 | 60299.4 |
| helix-turn-helix domain-containing protein | YT1_RS22950 | Not Available | Negative | 4811824 - 4812408 | 21246.5 |
| class i sam-dependent methyltransferase | YT1_RS22955 | Not Available | Positive | 4812458 - 4813297 | 30766.0 |
| hypothetical protein | YT1_RS22960 | Not Available | Negative | 4813336 - 4814010 | 24727.1 |
| tigr03619 family f420-dependent llm class oxidoreductase | YT1_RS22965 | Not Available | Negative | 4814057 - 4814971 | 32847.4 |
| sdr family nad(p)-dependent oxidoreductase | YT1_RS22970 | Not Available | Negative | 4814997 - 4815818 | 28637.8 |
| nad-dependent epimerase/dehydratase family protein | YT1_RS22975 | Not Available | Negative | 4815896 - 4816864 | 33395.7 |
| scbr family autoregulator-binding transcription factor | YT1_RS22980 | Not Available | Positive | 4816909 - 4817553 | 23514.3 |
| scba/barx family gamma-butyrolactone biosynthesis protein | YT1_RS22985 | Not Available | Negative | 4817571 - 4818509 | 34330.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


