Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| potassium channel family protein | YT1_RS03060 | Not Available | Positive | 423244 - 423783 | 19491.1 |
| duf2252 domain-containing protein | YT1_RS03065 | Not Available | Positive | 423797 - 425215 | 52407.1 |
| hypothetical protein | YT1_RS03070 | Not Available | Negative | 425291 - 425563 | 9649.84 |
| duf6325 family protein | YT1_RS03075 | Not Available | Negative | 425787 - 426257 | 16817.8 |
| cation:proton antiporter | YT1_RS03080 | Not Available | Negative | 426564 - 427799 | 42119.1 |
| arylsulfatase | YT1_RS03085 | Not Available | Positive | 428060 - 430414 | 86310.8 |
| shoct domain-containing protein | YT1_RS03090 | Not Available | Negative | 430769 - 431182 | 15436.7 |
| hypothetical protein | YT1_RS03095 | Not Available | Positive | 431423 - 432040 | 21916.2 |
| hypothetical protein | YT1_RS03100 | Not Available | Positive | 432117 - 432344 | 8417.02 |
| hypothetical protein | YT1_RS03105 | Not Available | Positive | 432464 - 432877 | 14819.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


