Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-keto-5-aminohexanoate cleavage protein | YT1_RS22735 | Not Available | Negative | 4767899 - 4768951 | 39104.6 |
| taud/tfda dioxygenase family protein | YT1_RS22740 | Not Available | Negative | 4769004 - 4769900 | 33651.8 |
| acyl-coa dehydrogenase family protein | YT1_RS22745 | Not Available | Positive | 4770581 - 4771726 | 42200.3 |
| long-chain-fatty-acid--coa ligase | YT1_RS22750 | Not Available | Positive | 4771947 - 4773467 | 53700.5 |
| helix-turn-helix transcriptional regulator | YT1_RS22755 | Not Available | Positive | 4773464 - 4774543 | 38285.8 |
| is3 family transposase | YT1_RS22760 | Not Available | Negative | 4774574 - 4775847 | 47831.2 |
| mfs transporter | YT1_RS22770 | Not Available | Negative | 4776124 - 4777380 | 43626.1 |
| enolase c-terminal domain-like protein | YT1_RS22775 | Not Available | Negative | 4777377 - 4778405 | 35467.6 |
| plp-dependent cysteine synthase family protein | YT1_RS22780 | Not Available | Negative | 4778402 - 4779475 | 38472.9 |
| hypothetical protein | YT1_RS22785 | Not Available | Negative | 4779472 - 4780320 | 29754.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


