Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | YT1_RS22685 | Not Available | Negative | 4757662 - 4757994 | 12139.2 |
| hypothetical protein | YT1_RS22690 | Not Available | Positive | 4758185 - 4758424 | 9015.54 |
| hoxn/hupn/nixa family nickel/cobalt transporter | YT1_RS22695 | Not Available | Positive | 4758526 - 4759566 | 34930.7 |
| mfs transporter | YT1_RS22700 | Not Available | Positive | 4759651 - 4760967 | 46072.5 |
| arsr/smtb family transcription factor | YT1_RS22705 | Not Available | Positive | 4760960 - 4761625 | 23989.6 |
| alkaline phosphatase phox | YT1_RS22710 | Not Available | Positive | 4761744 - 4763156 | 49128.0 |
| tigr03668 family ppox class f420-dependent oxidoreductase | YT1_RS22715 | Not Available | Negative | 4763103 - 4763564 | 16795.9 |
| hypothetical protein | YT1_RS22720 | Not Available | Negative | 4763593 - 4763859 | 9675.4 |
| atp-dependent zinc metalloprotease ftsh | YT1_RS22725 | Not Available | Negative | 4763943 - 4765763 | 64374.6 |
| mfs transporter | YT1_RS22730 | Not Available | Negative | 4766401 - 4767759 | 46644.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


