Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh:flavin oxidoreductase | YT1_RS22485 | Not Available | Positive | 4710867 - 4712060 | 42983.7 |
| amp-binding protein | YT1_RS22490 | Not Available | Positive | 4712075 - 4713772 | 61328.5 |
| sdr family nad(p)-dependent oxidoreductase | YT1_RS22495 | Not Available | Positive | 4713776 - 4714642 | 29762.6 |
| llm class f420-dependent oxidoreductase | YT1_RS22500 | Not Available | Positive | 4714639 - 4715523 | 31258.5 |
| acyl-coa dehydrogenase family protein | YT1_RS22505 | Not Available | Positive | 4715623 - 4716789 | 42312.5 |
| bifunctional maoc family dehydratase n-terminal/ob-fold nucleic acid binding domain-containing protein | YT1_RS22510 | Not Available | Positive | 4716786 - 4717784 | 36526.0 |
| acyl-coa dehydrogenase family protein | YT1_RS22515 | Not Available | Positive | 4717785 - 4718897 | 38795.1 |
| maoc family dehydratase | YT1_RS22520 | Not Available | Positive | 4718894 - 4719334 | 15666.7 |
| lipid-transfer protein | YT1_RS22525 | Not Available | Positive | 4719331 - 4720506 | 41419.2 |
| maoc/paaz c-terminal domain-containing protein | YT1_RS22530 | Not Available | Positive | 4720523 - 4721335 | 28377.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


