Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9, 17-dione monooxygenase oxygenase subunit | YT1_RS22435 | Not Available | Positive | 4698489 - 4699655 | 42262.3 |
| tetr family transcriptional regulator | YT1_RS22440 | Not Available | Positive | 4699825 - 4700469 | 23397.0 |
| steroid 3-ketoacyl-coa thiolase | YT1_RS22445 | Not Available | Positive | 4700684 - 4701844 | 39777.2 |
| acyl-coa dehydrogenase | YT1_RS22450 | Not Available | Positive | 4701873 - 4704065 | 77516.4 |
| lipid-transfer protein | YT1_RS22455 | Not Available | Positive | 4704062 - 4705312 | 43804.8 |
| maoc/paaz c-terminal domain-containing protein | YT1_RS22460 | Not Available | Positive | 4705315 - 4706187 | 30724.8 |
| paai family thioesterase | YT1_RS22465 | Not Available | Positive | 4706184 - 4706834 | 22863.3 |
| sdr family nad(p)-dependent oxidoreductase | YT1_RS22470 | Not Available | Positive | 4706845 - 4707633 | 28078.2 |
| biosynthetic peptidoglycan transglycosylase | YT1_RS22475 | Not Available | Positive | 4707762 - 4708916 | 42542.4 |
| class i adenylate-forming enzyme family protein | YT1_RS22480 | Not Available | Negative | 4708985 - 4710649 | 60951.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


