Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | YT1_RS22340 | Not Available | Positive | 4680224 - 4681171 | 32705.9 |
| abc transporter permease subunit | YT1_RS22345 | Not Available | Positive | 4681168 - 4682004 | 29291.3 |
| abc transporter atp-binding protein | YT1_RS22350 | Not Available | Positive | 4682001 - 4683440 | 50516.8 |
| enhanced intracellular survival protein eis | YT1_RS22355 | Not Available | Positive | 4683548 - 4684753 | 44007.3 |
| hypothetical protein | YT1_RS22360 | Not Available | Negative | 4684885 - 4685916 | 38217.1 |
| hypothetical protein | YT1_RS22365 | Not Available | Negative | 4686013 - 4686321 | 10674.1 |
| hypothetical protein | YT1_RS22370 | Not Available | Negative | 4686419 - 4686871 | 15875.0 |
| duf6745 domain-containing protein | YT1_RS22375 | Not Available | Negative | 4686891 - 4688033 | 41846.4 |
| voc family protein | YT1_RS22380 | Not Available | Negative | 4688273 - 4688722 | 15600.6 |
| flavin reductase family protein | YT1_RS22385 | Not Available | Negative | 4688802 - 4689329 | 19315.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


