Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | YT1_RS22240 | Not Available | Negative | 4661756 - 4662631 | 30755.0 |
| ppox class f420-dependent oxidoreductase | YT1_RS22245 | Not Available | Negative | 4662653 - 4663084 | 15660.4 |
| patatin-like phospholipase family protein | YT1_RS22250 | Not Available | Negative | 4663089 - 4664120 | 37283.3 |
| hypothetical protein | YT1_RS22255 | Not Available | Positive | 4664480 - 4664734 | 9086.61 |
| dctp deaminase | YT1_RS22260 | Not Available | Negative | 4664765 - 4665355 | 21254.4 |
| alpha/beta fold hydrolase | YT1_RS22265 | Not Available | Positive | 4665450 - 4666613 | 42116.3 |
| merr family transcriptional regulator | YT1_RS22270 | Not Available | Negative | 4666654 - 4667031 | 13742.5 |
| sulp family inorganic anion transporter | YT1_RS22275 | Not Available | Positive | 4667236 - 4668777 | 54014.1 |
| tetr/acrr family transcriptional regulator | YT1_RS22280 | Not Available | Negative | 4668804 - 4669421 | 22445.6 |
| oxygenase mpab family protein | YT1_RS22285 | Not Available | Positive | 4669512 - 4670333 | 31199.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


