Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cation-transporting p-type atpase | YT1_RS22140 | Not Available | Negative | 4637490 - 4640189 | 96737.0 |
| duf2243 domain-containing protein | YT1_RS22145 | Not Available | Negative | 4640189 - 4640521 | 11892.7 |
| oxygenase mpab family protein | YT1_RS22150 | Not Available | Negative | 4640560 - 4641492 | 36081.0 |
| cytochrome p450 | YT1_RS22155 | Not Available | Negative | 4641678 - 4643135 | 54274.1 |
| hypothetical protein | YT1_RS22160 | Not Available | Positive | 4643394 - 4643606 | 7689.97 |
| helix-turn-helix transcriptional regulator | YT1_RS27850 | Not Available | Negative | 4643904 - 4646516 | 93011.1 |
| hypothetical protein | YT1_RS22170 | Not Available | Negative | 4646679 - 4647095 | 15117.7 |
| nucleoside deaminase | YT1_RS22175 | Not Available | Negative | 4647247 - 4647729 | 17225.4 |
| lipase family protein | YT1_RS22180 | Not Available | Negative | 4647817 - 4649064 | 42906.1 |
| nuclear transport factor 2 family protein | YT1_RS22185 | Not Available | Positive | 4649245 - 4649724 | 18396.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


