Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | YT1_RS22085 | Not Available | Negative | 4628028 - 4628474 | 16038.6 |
| competence/damage-inducible protein a | YT1_RS22090 | Not Available | Positive | 4628547 - 4629830 | 45054.8 |
| formylglycine-generating enzyme family protein | YT1_RS22095 | Not Available | Positive | 4630275 - 4631186 | 33870.1 |
| iclr family transcriptional regulator | YT1_RS22105 | Not Available | Positive | 4631658 - 4632431 | 27622.5 |
| tetr/acrr family transcriptional regulator | YT1_RS22110 | Not Available | Positive | 4632503 - 4633090 | 22300.0 |
| rieske 2fe-2s domain-containing protein | YT1_RS22115 | Not Available | Negative | 4633122 - 4634255 | 43066.6 |
| hypothetical protein | YT1_RS22120 | Not Available | Negative | 4634303 - 4634554 | 9203.92 |
| sdr family nad(p)-dependent oxidoreductase | YT1_RS22125 | Not Available | Negative | 4634716 - 4635471 | 26182.2 |
| ercc4 domain-containing protein | YT1_RS22130 | Not Available | Positive | 4635584 - 4636531 | 35015.8 |
| universal stress protein | YT1_RS22135 | Not Available | Negative | 4636636 - 4637484 | 29549.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


