Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | YT1_RS21975 | Not Available | Positive | 4611007 - 4612191 | 40200.0 |
| dihydrofolate reductase family protein | YT1_RS21980 | Not Available | Negative | 4612396 - 4612962 | 21067.0 |
| gyri-like domain-containing protein | YT1_RS21985 | Not Available | Negative | 4613170 - 4613793 | 23906.4 |
| abc transporter permease | YT1_RS21995 | Not Available | Negative | 4614022 - 4614795 | 26978.3 |
| abc transporter atp-binding protein | YT1_RS22000 | Not Available | Negative | 4614792 - 4615586 | 28542.4 |
| duf1048 domain-containing protein | YT1_RS22005 | Not Available | Negative | 4615583 - 4615951 | 13918.4 |
| padr family transcriptional regulator | YT1_RS22010 | Not Available | Negative | 4615954 - 4616283 | 12479.0 |
| mfs transporter | YT1_RS22020 | Not Available | Negative | 4616837 - 4617316 | 16554.6 |
| zinc-dependent alcohol dehydrogenase family protein | YT1_RS22025 | Not Available | Negative | 4617369 - 4618391 | 36121.5 |
| choloylglycine hydrolase | YT1_RS22030 | Not Available | Negative | 4618679 - 4619650 | 36339.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


