Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | YT1_RS27370 | Not Available | Positive | 4599766 - 4599942 | 6218.77 |
| hypothetical protein | YT1_RS21935 | Not Available | Negative | 4599970 - 4600194 | 7027.72 |
| selt/selw/selh family protein | YT1_RS21940 | Not Available | Negative | 4600382 - 4600681 | 10760.8 |
| hypothetical protein | YT1_RS27375 | Not Available | Negative | 4600900 - 4601061 | 6058.38 |
| hypothetical protein | YT1_RS21945 | Not Available | Negative | 4601131 - 4602930 | 64038.1 |
| hypothetical protein | YT1_RS21950 | Not Available | Positive | 4603256 - 4605229 | 67397.1 |
| hypothetical protein | YT1_RS21955 | Not Available | Positive | 4605199 - 4606707 | 54829.4 |
| glycosyltransferase | YT1_RS21960 | Not Available | Positive | 4606692 - 4608125 | 52869.1 |
| arnt family glycosyltransferase | YT1_RS21965 | Not Available | Positive | 4608122 - 4609735 | 57952.0 |
| marr family winged helix-turn-helix transcriptional regulator | YT1_RS21970 | Not Available | Negative | 4610415 - 4610867 | 16542.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


