Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hsp70 family protein | YT1_RS21835 | Not Available | Negative | 4555375 - 4556775 | 48459.1 |
| protein-tyrosine-phosphatase | YT1_RS21840 | Not Available | Positive | 4556930 - 4557445 | 18273.1 |
| polysaccharide biosynthesis tyrosine autokinase | YT1_RS21845 | Not Available | Negative | 4557416 - 4559053 | 57942.6 |
| non-ribosomal peptide synthetase | YT1_RS21850 | Not Available | Negative | 4559053 - 4577898 | 658457.0 |
| duf4012 domain-containing protein | YT1_RS21855 | Not Available | Positive | 4578168 - 4579949 | 62871.7 |
| right-handed parallel beta-helix repeat-containing protein | YT1_RS21860 | Not Available | Positive | 4580045 - 4581430 | 48441.6 |
| nitroreductase family protein | YT1_RS21865 | Not Available | Negative | 4581494 - 4582543 | 38587.6 |
| polysaccharide pyruvyl transferase family protein | YT1_RS21870 | Not Available | Negative | 4582536 - 4583696 | 42158.6 |
| lipid ii flippase murj | YT1_RS21875 | Not Available | Negative | 4583699 - 4585228 | 53149.9 |
| glycosyltransferase family 4 protein | YT1_RS21880 | Not Available | Negative | 4585287 - 4586471 | 42799.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


