Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enoyl-coa hydratase | YT1_RS02960 | Not Available | Negative | 406613 - 407395 | 26413.5 |
| nadph:quinone oxidoreductase family protein | YT1_RS02965 | Not Available | Negative | 407427 - 408395 | 33422.2 |
| crotonase/enoyl-coa hydratase family protein | YT1_RS02970 | Not Available | Positive | 408584 - 409384 | 27718.8 |
| thiolase family protein | YT1_RS02975 | Not Available | Positive | 409463 - 410656 | 41254.0 |
| 3-hydroxyacyl-coa dehydrogenase | YT1_RS02980 | Not Available | Positive | 410683 - 411444 | 25927.4 |
| tetr/acrr family transcriptional regulator | YT1_RS02985 | Not Available | Positive | 411482 - 412108 | 23043.6 |
| acyl-coa dehydrogenase family protein | YT1_RS02990 | Not Available | Positive | 412165 - 413322 | 42128.1 |
| sdr family nad(p)-dependent oxidoreductase | YT1_RS02995 | Not Available | Positive | 413351 - 414109 | 25693.5 |
| putative quinol monooxygenase | YT1_RS03000 | Not Available | Positive | 414156 - 414443 | 10595.6 |
| hypothetical protein | YT1_RS27095 | Not Available | Positive | 414578 - 414736 | 5523.49 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


