Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| padr family transcriptional regulator | YT1_RS21685 | Not Available | Negative | 4516621 - 4517265 | 24226.5 |
| nuclear transport factor 2 family protein | YT1_RS21690 | Not Available | Positive | 4517531 - 4517914 | 14071.4 |
| hypothetical protein | YT1_RS21695 | Not Available | Positive | 4517926 - 4518174 | 9097.71 |
| flavin reductase family protein | YT1_RS21700 | Not Available | Positive | 4518299 - 4518838 | 19170.6 |
| llm class flavin-dependent oxidoreductase | YT1_RS21705 | Not Available | Positive | 4518943 - 4519932 | 35685.5 |
| heat shock protein transcriptional repressor hspr | YT1_RS21710 | Not Available | Negative | 4520055 - 4520462 | 15327.4 |
| molecular chaperone dnaj | YT1_RS21715 | Not Available | Negative | 4520462 - 4521643 | 41018.1 |
| nucleotide exchange factor grpe | YT1_RS21720 | Not Available | Negative | 4521677 - 4522321 | 23014.4 |
| molecular chaperone dnak | YT1_RS21725 | Not Available | Negative | 4522318 - 4524162 | 65765.3 |
| hypothetical protein | YT1_RS21730 | Not Available | Positive | 4524402 - 4524899 | 16870.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


