Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | YT1_RS21585 | Not Available | Negative | 4494511 - 4495278 | 27129.5 |
| hypothetical protein | YT1_RS21590 | Not Available | Positive | 4495342 - 4495788 | 16266.8 |
| lysoplasmalogenase | YT1_RS21595 | Not Available | Negative | 4495809 - 4496552 | 25525.2 |
| galactokinase | YT1_RS21600 | Not Available | Negative | 4496599 - 4497735 | 38421.8 |
| galactose-1-phosphate uridylyltransferase | YT1_RS21605 | Not Available | Negative | 4497732 - 4498838 | 41096.5 |
| orotate phosphoribosyltransferase | YT1_RS21610 | Not Available | Negative | 4498847 - 4499386 | 18917.8 |
| lema family protein | YT1_RS21615 | Not Available | Negative | 4499464 - 4500072 | 21385.1 |
| sdr family nad(p)-dependent oxidoreductase | YT1_RS21620 | Not Available | Negative | 4500180 - 4500968 | 27173.8 |
| hypothetical protein | YT1_RS21625 | Not Available | Negative | 4501015 - 4501674 | 24348.2 |
| duf5666 domain-containing protein | YT1_RS21630 | Not Available | Negative | 4501705 - 4502655 | 32849.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


