Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cob(i)yrinic acid a,c-diamide adenosyltransferase | YT1_RS21485 | Not Available | Positive | 4475710 - 4476324 | 22636.8 |
| cobyrinate a,c-diamide synthase | YT1_RS21490 | Not Available | Positive | 4476386 - 4478746 | 81553.6 |
| cobalamin biosynthesis protein | YT1_RS21495 | Not Available | Positive | 4478734 - 4479678 | 32554.0 |
| hypothetical protein | YT1_RS21500 | Not Available | Positive | 4479730 - 4480287 | 20741.6 |
| cobalt-precorrin-6a reductase | YT1_RS21505 | Not Available | Negative | 4480336 - 4481070 | 25334.4 |
| cobyric acid synthase | YT1_RS21510 | Not Available | Negative | 4481067 - 4482560 | 52258.7 |
| cbta family protein | YT1_RS21515 | Not Available | Negative | 4482566 - 4483381 | 27716.9 |
| cbtb domain-containing protein | YT1_RS21520 | Not Available | Negative | 4483393 - 4483557 | 5712.16 |
| histidine phosphatase family protein | YT1_RS21525 | Not Available | Positive | 4483794 - 4484324 | 18649.3 |
| cation diffusion facilitator family transporter | YT1_RS21530 | Not Available | Negative | 4484331 - 4485263 | 32253.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


