Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | YT1_RS21435 | Not Available | Positive | 4462442 - 4462954 | 18435.5 |
| duf6790 family protein | YT1_RS21440 | Not Available | Positive | 4463086 - 4463607 | 18454.3 |
| precorrin-6a synthase (deacetylating) | YT1_RS21445 | Not Available | Negative | 4463572 - 4464345 | 28066.5 |
| cobaltochelatase subunit cobn | YT1_RS21450 | Not Available | Negative | 4464342 - 4467950 | 129251.0 |
| cobalamin biosynthesis protein cobg | YT1_RS21455 | Not Available | Positive | 4468237 - 4469307 | 36562.2 |
| precorrin-8x methylmutase | YT1_RS21460 | Not Available | Positive | 4469304 - 4469954 | 22671.1 |
| precorrin-2 c(20)-methyltransferase | YT1_RS21465 | Not Available | Positive | 4469951 - 4471474 | 53464.7 |
| cobalt-precorrin-4/precorrin-4 c(11)-methyltransferase | YT1_RS21470 | Not Available | Negative | 4471530 - 4472291 | 26825.1 |
| bifunctional cobalt-precorrin-7 (c(5))-methyltransferase/cobalt-precorrin-6b (c(15))-methyltransferase | YT1_RS21475 | Not Available | Negative | 4472288 - 4473490 | 41646.7 |
| vwa domain-containing protein | YT1_RS21480 | Not Available | Positive | 4473757 - 4475709 | 68347.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


