Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxamine 5'-phosphate oxidase family protein | YT1_RS21385 | Not Available | Positive | 4451644 - 4452111 | 17164.4 |
| hypothetical protein | YT1_RS21390 | Not Available | Positive | 4452395 - 4453453 | 39652.6 |
| glycosyltransferase family 4 protein | YT1_RS21395 | Not Available | Positive | 4453450 - 4454556 | 38999.8 |
| glycosyltransferase | YT1_RS21400 | Not Available | Positive | 4454553 - 4455560 | 36004.7 |
| glycosyltransferase family 2 protein | YT1_RS21405 | Not Available | Positive | 4455557 - 4456498 | 33214.2 |
| catalase | YT1_RS21410 | Not Available | Positive | 4456532 - 4458676 | 77286.0 |
| glucose 1-dehydrogenase | YT1_RS21415 | Not Available | Negative | 4458808 - 4459704 | 32377.2 |
| hypothetical protein | YT1_RS21420 | Not Available | Positive | 4459971 - 4460291 | 11580.8 |
| hypothetical protein | YT1_RS21425 | Not Available | Positive | 4460353 - 4460877 | 17297.4 |
| pepsy-associated tm helix domain-containing protein | YT1_RS21430 | Not Available | Positive | 4460971 - 4462407 | 50580.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


