Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vitamin b12-dependent ribonucleotide reductase | YT1_RS21335 | Not Available | Positive | 4437847 - 4440486 | 94726.2 |
| voc family protein | YT1_RS21340 | Not Available | Negative | 4440514 - 4440894 | 13881.4 |
| nuclear transport factor 2 family protein | YT1_RS21345 | Not Available | Positive | 4440980 - 4441360 | 13913.9 |
| caib/baif coa transferase family protein | YT1_RS21350 | Not Available | Positive | 4441450 - 4442547 | 39011.8 |
| serine/threonine-protein kinase | YT1_RS21355 | Not Available | Negative | 4442618 - 4446097 | 126789.0 |
| plp-dependent aminotransferase family protein | YT1_RS21360 | Not Available | Negative | 4446208 - 4447671 | 51987.6 |
| methylated-dna--[protein]-cysteine s-methyltransferase | YT1_RS21365 | Not Available | Positive | 4447738 - 4448277 | 18424.1 |
| adenylosuccinate synthase | YT1_RS21370 | Not Available | Negative | 4448297 - 4449586 | 46278.4 |
| hypothetical protein | YT1_RS21375 | Not Available | Positive | 4449851 - 4450501 | 23396.3 |
| helix-turn-helix transcriptional regulator | YT1_RS21380 | Not Available | Negative | 4450630 - 4451580 | 33558.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


