Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | YT1_RS21285 | Not Available | Negative | 4427967 - 4428773 | 28242.2 |
| feccd family abc transporter permease | YT1_RS21290 | Not Available | Negative | 4428770 - 4429798 | 34969.1 |
| abc transporter substrate-binding protein | YT1_RS21295 | Not Available | Negative | 4429795 - 4430739 | 31964.3 |
| duf808 domain-containing protein | YT1_RS21300 | Not Available | Negative | 4431037 - 4431987 | 33027.0 |
| o-succinylhomoserine sulfhydrylase | YT1_RS21305 | Not Available | Negative | 4432226 - 4433449 | 44003.4 |
| rhodanese-like domain-containing protein | YT1_RS21310 | Not Available | Negative | 4433446 - 4433856 | 14833.3 |
| hypothetical protein | YT1_RS21315 | Not Available | Negative | 4433919 - 4434347 | 15442.8 |
| fad-dependent oxidoreductase | YT1_RS21320 | Not Available | Positive | 4434642 - 4436027 | 50734.8 |
| duf456 domain-containing protein | YT1_RS21325 | Not Available | Negative | 4436119 - 4436601 | 16537.0 |
| formate-dependent phosphoribosylglycinamide formyltransferase | YT1_RS21330 | Not Available | Negative | 4436598 - 4437803 | 42671.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


