Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | YT1_RS21235 | Not Available | Negative | 4414827 - 4415633 | 28566.9 |
| hydantoinase b/oxoprolinase family protein | YT1_RS21240 | Not Available | Negative | 4415735 - 4418059 | 86127.5 |
| hydantoinase/oxoprolinase family protein | YT1_RS21245 | Not Available | Negative | 4418085 - 4420211 | 77134.6 |
| acetone carboxylase subunit gamma | YT1_RS21250 | Not Available | Negative | 4420242 - 4420664 | 16270.9 |
| hydantoinase/oxoprolinase family protein | YT1_RS21255 | Not Available | Negative | 4420718 - 4422637 | 67689.1 |
| sulfite exporter taue/safe family protein | YT1_RS21260 | Not Available | Positive | 4423013 - 4423783 | 26793.4 |
| had-iia family hydrolase | YT1_RS21265 | Not Available | Positive | 4423849 - 4424607 | 27256.7 |
| mspa family porin | YT1_RS21270 | Not Available | Negative | 4424805 - 4425497 | 23178.3 |
| mspa family porin | YT1_RS21275 | Not Available | Negative | 4425562 - 4426266 | 23222.3 |
| bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | YT1_RS21280 | Not Available | Negative | 4426621 - 4427967 | 47933.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


