Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiazole synthase | YT1_RS21135 | Not Available | Negative | 4392400 - 4393194 | 27257.8 |
| sulfur carrier protein this | YT1_RS21140 | Not Available | Negative | 4393187 - 4393402 | 7494.92 |
| glycine oxidase thio | YT1_RS21145 | Not Available | Negative | 4393408 - 4394475 | 37194.3 |
| thiamine phosphate synthase | YT1_RS21150 | Not Available | Positive | 4394603 - 4395292 | 24424.1 |
| nudix hydrolase | YT1_RS21155 | Not Available | Negative | 4395359 - 4396210 | 29874.1 |
| hypothetical protein | YT1_RS21160 | Not Available | Positive | 4396339 - 4397697 | 47175.4 |
| glutamate abc transporter substrate-binding protein | YT1_RS21165 | Not Available | Positive | 4397700 - 4398659 | 34121.8 |
| serine/threonine-protein kinase | YT1_RS21170 | Not Available | Positive | 4398669 - 4401101 | 87082.0 |
| endonuclease domain-containing protein | YT1_RS21175 | Not Available | Positive | 4401265 - 4402134 | 31518.7 |
| acetate kinase | YT1_RS21180 | Not Available | Negative | 4402218 - 4403417 | 42778.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


