Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fatty acid desaturase family protein | YT1_RS20885 | Not Available | Negative | 4339593 - 4340996 | 51800.5 |
| ferredoxin reductase | YT1_RS20890 | Not Available | Negative | 4341013 - 4342110 | 40460.6 |
| dihydrolipoyl dehydrogenase | YT1_RS20895 | Not Available | Negative | 4342264 - 4343667 | 49741.7 |
| sdr family oxidoreductase | YT1_RS20900 | Not Available | Negative | 4343803 - 4344642 | 29391.4 |
| wax ester/triacylglycerol synthase domain-containing protein | YT1_RS20905 | Not Available | Negative | 4344779 - 4346095 | 45832.2 |
| prolyl oligopeptidase family serine peptidase | YT1_RS20910 | Not Available | Positive | 4346180 - 4348192 | 74905.1 |
| alpha/beta fold hydrolase | YT1_RS20915 | Not Available | Negative | 4348196 - 4349047 | 30437.2 |
| patatin-like phospholipase family protein | YT1_RS20920 | Not Available | Negative | 4349057 - 4350088 | 35656.6 |
| pasta domain-containing protein | YT1_RS20925 | Not Available | Positive | 4350200 - 4350634 | 14790.5 |
| phage holin family protein | YT1_RS20930 | Not Available | Positive | 4350729 - 4351112 | 13129.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


