Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l10 | YT1_RS19970 | Not Available | Negative | 4175383 - 4175916 | 18321.0 |
| 50s ribosomal protein l1 | YT1_RS19975 | Not Available | Negative | 4176289 - 4177002 | 25044.0 |
| 50s ribosomal protein l11 | YT1_RS19980 | Not Available | Negative | 4177126 - 4177560 | 15287.7 |
| transcription termination/antitermination protein nusg | YT1_RS19985 | Not Available | Negative | 4177631 - 4178473 | 30198.8 |
| preprotein translocase subunit sece | YT1_RS19990 | Not Available | Negative | 4178520 - 4178942 | 14761.6 |
| Trna-trp | Not Available | Not Available | Positive | 4178972 - 4179047 | Not Available |
| (3r)-hydroxyacyl-acp dehydratase subunit hadb | YT1_RS20000 | Not Available | Negative | 4179222 - 4179647 | 15072.0 |
| (3r)-hydroxyacyl-acp dehydratase subunit hada | YT1_RS20005 | Not Available | Negative | 4179634 - 4180209 | 21212.0 |
| 50s ribosomal protein l33 | YT1_RS20010 | Not Available | Negative | 4180297 - 4180464 | 6454.79 |
| Trna-met | Not Available | Not Available | Positive | 4180523 - 4180598 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


