Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mce family protein | YT1_RS19920 | Not Available | Negative | 4164601 - 4165848 | 43901.1 |
| mce family protein | YT1_RS19925 | Not Available | Negative | 4165848 - 4167122 | 43997.5 |
| mce family protein | YT1_RS19930 | Not Available | Negative | 4167119 - 4168366 | 43961.1 |
| mce family protein | YT1_RS19935 | Not Available | Negative | 4168366 - 4169361 | 36023.8 |
| mce family protein | YT1_RS19940 | Not Available | Negative | 4169358 - 4170437 | 38168.6 |
| mce family protein | YT1_RS19945 | Not Available | Negative | 4170434 - 4171801 | 48069.0 |
| mlae family abc transporter permease | YT1_RS19950 | Not Available | Negative | 4171798 - 4172658 | 30407.6 |
| mlae family abc transporter permease | YT1_RS19955 | Not Available | Negative | 4172663 - 4173463 | 27576.2 |
| abc transporter atp-binding protein | YT1_RS19960 | Not Available | Negative | 4173472 - 4174572 | 40021.9 |
| 50s ribosomal protein l7/l12 | YT1_RS19965 | Not Available | Negative | 4174891 - 4175277 | 13380.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


