Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rieske (2fe-2s) protein | YT1_RS19870 | Not Available | Negative | 4148164 - 4148652 | 16342.2 |
| dha2 family efflux mfs transporter permease subunit | YT1_RS19875 | Not Available | Negative | 4148754 - 4150283 | 52842.4 |
| fad-dependent oxidoreductase | YT1_RS19880 | Not Available | Negative | 4150588 - 4152282 | 61388.8 |
| acyl-[acyl-carrier-protein] thioesterase | YT1_RS19885 | Not Available | Positive | 4152437 - 4153264 | 30526.6 |
| sixa phosphatase family protein | YT1_RS19890 | Not Available | Positive | 4153288 - 4153779 | 17729.0 |
| iron-siderophore abc transporter substrate-binding protein | YT1_RS19895 | Not Available | Negative | 4153910 - 4154899 | 34415.1 |
| dna-directed rna polymerase subunit beta' | YT1_RS19900 | Not Available | Negative | 4155097 - 4159068 | 147133.0 |
| dna-directed rna polymerase subunit beta | YT1_RS19905 | Not Available | Negative | 4159180 - 4162686 | 128556.0 |
| hypothetical protein | YT1_RS19910 | Not Available | Negative | 4163027 - 4163887 | 28820.2 |
| type ii restriction endonuclease | YT1_RS19915 | Not Available | Negative | 4163909 - 4164505 | 20319.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


