Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3558 domain-containing protein | YT1_RS19765 | Not Available | Negative | 4129266 - 4129799 | 18247.4 |
| duf3558 domain-containing protein | YT1_RS19770 | Not Available | Negative | 4129796 - 4130338 | 18299.3 |
| tetr/acrr family transcriptional regulator | YT1_RS19775 | Not Available | Negative | 4130348 - 4130977 | 23124.6 |
| tetr/acrr family transcriptional regulator | YT1_RS19780 | Not Available | Negative | 4130974 - 4131630 | 24568.3 |
| enoyl-coa hydratase family protein | YT1_RS19785 | Not Available | Negative | 4131778 - 4132557 | 27183.5 |
| acyl-coa dehydrogenase family protein | YT1_RS19790 | Not Available | Negative | 4132569 - 4133729 | 41295.7 |
| helix-turn-helix transcriptional regulator | YT1_RS27725 | Not Available | Negative | 4133729 - 4135961 | 80451.6 |
| acyl-coa carboxylase subunit beta | YT1_RS19805 | Not Available | Negative | 4135969 - 4137567 | 57213.4 |
| acyl-coa dehydrogenase family protein | YT1_RS19810 | Not Available | Negative | 4137564 - 4138712 | 40404.1 |
| acyclic terpene utilization atua family protein | YT1_RS19815 | Not Available | Negative | 4138709 - 4140469 | 61630.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


