Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mycofactocin biosynthesis chaperone mftb | YT1_RS19615 | Not Available | Negative | 4100703 - 4101038 | 12165.6 |
| mycofactocin precursor mfta | YT1_RS19620 | Not Available | Negative | 4101023 - 4101118 | 3420.92 |
| mycofactocin system transcriptional regulator | YT1_RS19625 | Not Available | Positive | 4101243 - 4101902 | 24048.7 |
| mycofactocin oligosaccharide methyltransferase mftm | YT1_RS19630 | Not Available | Positive | 4101899 - 4102708 | 28592.1 |
| abc transporter permease | YT1_RS19635 | Not Available | Negative | 4102835 - 4104469 | 56459.7 |
| abc transporter atp-binding protein | YT1_RS19640 | Not Available | Negative | 4104466 - 4105428 | 34723.5 |
| lipase family protein | YT1_RS19645 | Not Available | Positive | 4105575 - 4106801 | 41946.9 |
| madr family response regulator transcription factor | YT1_RS19650 | Not Available | Negative | 4106827 - 4107495 | 23933.0 |
| mads family sensor histidine kinase | YT1_RS19655 | Not Available | Negative | 4107492 - 4108931 | 51891.5 |
| iron-containing alcohol dehydrogenase | YT1_RS19660 | Not Available | Negative | 4108928 - 4110103 | 40815.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


