Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | YT1_RS19475 | Not Available | Positive | 4063763 - 4064287 | 19001.7 |
| hypothetical protein | YT1_RS19480 | Not Available | Negative | 4064298 - 4065011 | 26603.1 |
| hypothetical protein | YT1_RS19485 | Not Available | Positive | 4065571 - 4066539 | 35332.2 |
| atp-dependent dna ligase | YT1_RS19490 | Not Available | Positive | 4066561 - 4067400 | 30360.1 |
| hypothetical protein | YT1_RS27845 | Not Available | Positive | 4067639 - 4067761 | 4398.91 |
| hypothetical protein | YT1_RS19495 | Not Available | Positive | 4067731 - 4071561 | 141691.0 |
| duf4268 domain-containing protein | YT1_RS27715 | Not Available | Negative | 4071623 - 4072117 | 18605.2 |
| hypothetical protein | YT1_RS27720 | Not Available | Negative | 4072127 - 4072672 | 20221.8 |
| giy-yig nuclease family protein | YT1_RS19510 | Not Available | Positive | 4073174 - 4073689 | 18935.3 |
| hypothetical protein | YT1_RS27360 | Not Available | Positive | 4073744 - 4074007 | 9956.64 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


