Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | YT1_RS19375 | Not Available | Negative | 4043149 - 4044480 | 46395.8 |
| helix-turn-helix transcriptional regulator | YT1_RS19380 | Not Available | Positive | 4044732 - 4045155 | 14915.9 |
| hypothetical protein | YT1_RS19385 | Not Available | Negative | 4045164 - 4045712 | 19386.7 |
| ethanolamine ammonia-lyase subunit eutc | YT1_RS19390 | Not Available | Negative | 4045834 - 4046598 | 26294.5 |
| ethanolamine ammonia-lyase subunit eutb | YT1_RS19395 | Not Available | Negative | 4046595 - 4048010 | 49279.0 |
| ethanolamine permease | YT1_RS19400 | Not Available | Negative | 4048007 - 4049461 | 50270.4 |
| duf779 domain-containing protein | YT1_RS19405 | Not Available | Negative | 4049578 - 4050114 | 18688.2 |
| aldehyde dehydrogenase | YT1_RS19410 | Not Available | Negative | 4050207 - 4051730 | 55141.3 |
| helix-turn-helix domain-containing protein | YT1_RS19415 | Not Available | Negative | 4051831 - 4053132 | 46799.5 |
| mycofactocin system gmc family oxidoreductase mftg | YT1_RS19420 | Not Available | Negative | 4053182 - 4054657 | 51376.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


