Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| maoc family dehydratase | YT1_RS19325 | Not Available | Negative | 4030380 - 4030865 | 17615.8 |
| acyl-coa dehydrogenase family protein | YT1_RS19330 | Not Available | Negative | 4030862 - 4032022 | 41323.9 |
| acetyl/propionyl/methylcrotonyl-coa carboxylase subunit alpha | YT1_RS19335 | Not Available | Negative | 4032033 - 4034054 | 71135.2 |
| carboxyl transferase domain-containing protein | YT1_RS19340 | Not Available | Negative | 4034066 - 4035673 | 57302.2 |
| tetr/acrr family transcriptional regulator | YT1_RS19345 | Not Available | Positive | 4035788 - 4036426 | 23397.8 |
| glsb/yeaq/ymge family stress response membrane protein | YT1_RS19350 | Not Available | Negative | 4036500 - 4036766 | 9572.1 |
| ndma-dependent alcohol dehydrogenase | YT1_RS19355 | Not Available | Negative | 4036922 - 4038034 | 38927.7 |
| aldehyde dehydrogenase family protein | YT1_RS19360 | Not Available | Negative | 4038060 - 4039559 | 53225.3 |
| sigma-54-dependent fis family transcriptional regulator | YT1_RS19365 | Not Available | Negative | 4039681 - 4041327 | 58621.7 |
| amp-binding protein | YT1_RS19370 | Not Available | Negative | 4041324 - 4042982 | 60253.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


