Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| non-ribosomal peptide synthetase | YT1_RS19275 | Not Available | Negative | 3936611 - 3948835 | 436338.0 |
| amino acid adenylation domain-containing protein | YT1_RS19280 | Not Available | Negative | 3949062 - 3954899 | 208288.0 |
| non-ribosomal peptide synthetase | YT1_RS19285 | Not Available | Negative | 3955451 - 3967546 | 428039.0 |
| non-ribosomal peptide synthetase | YT1_RS19290 | Not Available | Negative | 3967763 - 3975154 | 262336.0 |
| non-ribosomal peptide synthase/polyketide synthase | YT1_RS19295 | Not Available | Negative | 3975373 - 4004919 | 1055520.0 |
| non-ribosomal peptide synthase/polyketide synthase | YT1_RS19300 | Not Available | Negative | 4005063 - 4025876 | 747357.0 |
| hypothetical protein | YT1_RS19305 | Not Available | Negative | 4026165 - 4026512 | 11931.3 |
| acetoacetate--coa ligase | YT1_RS19310 | Not Available | Negative | 4026587 - 4028548 | 71443.7 |
| hpch/hpai aldolase/citrate lyase family protein | YT1_RS19315 | Not Available | Negative | 4028545 - 4029402 | 30364.1 |
| hpch/hpai aldolase/citrate lyase family protein | YT1_RS19320 | Not Available | Negative | 4029547 - 4030383 | 29668.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


