Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l24 | YT1_RS19175 | Not Available | Negative | 3922147 - 3922464 | 11219.4 |
| 50s ribosomal protein l14 | YT1_RS19180 | Not Available | Negative | 3922464 - 3922832 | 13388.4 |
| 30s ribosomal protein s17 | YT1_RS19185 | Not Available | Negative | 3923130 - 3923414 | 10845.3 |
| 50s ribosomal protein l29 | YT1_RS19190 | Not Available | Negative | 3923411 - 3923647 | 8816.52 |
| 50s ribosomal protein l16 | YT1_RS19195 | Not Available | Negative | 3923647 - 3924063 | 15878.4 |
| 30s ribosomal protein s3 | YT1_RS19200 | Not Available | Negative | 3924067 - 3924864 | 29311.0 |
| 50s ribosomal protein l22 | YT1_RS19205 | Not Available | Negative | 3924864 - 3925262 | 14246.2 |
| 30s ribosomal protein s19 | YT1_RS19210 | Not Available | Negative | 3925259 - 3925540 | 10663.9 |
| 50s ribosomal protein l2 | YT1_RS19215 | Not Available | Negative | 3925560 - 3926393 | 30297.6 |
| 50s ribosomal protein l23 | YT1_RS19220 | Not Available | Negative | 3926431 - 3926736 | 11141.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


