Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenylate kinase | YT1_RS19125 | Not Available | Negative | 3916419 - 3916964 | 19505.3 |
| preprotein translocase subunit secy | YT1_RS19130 | Not Available | Negative | 3916961 - 3918274 | 47231.6 |
| helix-turn-helix transcriptional regulator | YT1_RS19135 | Not Available | Negative | 3918522 - 3918964 | 15852.0 |
| 50s ribosomal protein l30 | YT1_RS19140 | Not Available | Negative | 3918961 - 3919161 | 7384.95 |
| 30s ribosomal protein s5 | YT1_RS19145 | Not Available | Negative | 3919161 - 3919811 | 22230.7 |
| 50s ribosomal protein l18 | YT1_RS19150 | Not Available | Negative | 3919843 - 3920250 | 14708.7 |
| 50s ribosomal protein l6 | YT1_RS19155 | Not Available | Negative | 3920253 - 3920792 | 19319.4 |
| 30s ribosomal protein s8 | YT1_RS19160 | Not Available | Negative | 3920807 - 3921205 | 14383.5 |
| type z 30s ribosomal protein s14 | YT1_RS19165 | Not Available | Negative | 3921389 - 3921574 | 7040.84 |
| 50s ribosomal protein l5 | YT1_RS19170 | Not Available | Negative | 3921579 - 3922145 | 21181.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


