Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vii secretion protein eccc | YT1_RS19030 | Not Available | Negative | 3895870 - 3899853 | 141395.0 |
| type vii secretion integral membrane protein eccd | YT1_RS19035 | Not Available | Positive | 3900086 - 3901546 | 47892.1 |
| type vii secretion-associated serine protease mycosin | YT1_RS19040 | Not Available | Positive | 3901548 - 3902945 | 47258.5 |
| type vii secretion protein eccb | YT1_RS19045 | Not Available | Negative | 3902891 - 3904345 | 50035.4 |
| type vii secretion protein ecce | YT1_RS19050 | Not Available | Positive | 3904451 - 3906076 | 56474.8 |
| nadph-dependent fmn reductase | YT1_RS19055 | Not Available | Negative | 3906064 - 3906630 | 20267.0 |
| tetr/acrr family transcriptional regulator | YT1_RS19060 | Not Available | Negative | 3906649 - 3907230 | 20994.1 |
| acyl-coa dehydrogenase family protein | YT1_RS19065 | Not Available | Positive | 3907288 - 3908430 | 40281.9 |
| hypothetical protein | YT1_RS27840 | Not Available | Positive | 3908654 - 3908788 | 4784.99 |
| alpha/beta hydrolase | YT1_RS19070 | Not Available | Negative | 3909063 - 3910055 | 34652.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


