Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| co-chaperone groes | YT1_RS18930 | Not Available | Negative | 3877225 - 3877527 | 10758.8 |
| hsp70 family protein | YT1_RS18935 | Not Available | Positive | 3878225 - 3879745 | 50798.0 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | YT1_RS18940 | Not Available | Negative | 3879775 - 3880815 | 35401.6 |
| ribosomal protein s18-alanine n-acetyltransferase | YT1_RS18945 | Not Available | Negative | 3880812 - 3881306 | 18220.4 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | YT1_RS18950 | Not Available | Negative | 3881303 - 3882007 | 23928.5 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | YT1_RS18955 | Not Available | Negative | 3882038 - 3882523 | 17135.1 |
| alpha/beta fold hydrolase | YT1_RS18960 | Not Available | Negative | 3882516 - 3883574 | 37541.8 |
| alanine racemase | YT1_RS18965 | Not Available | Negative | 3883571 - 3884755 | 42352.5 |
| bifunctional adp-dependent nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimerase | YT1_RS18970 | Not Available | Negative | 3884814 - 3886262 | 48354.0 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | YT1_RS18975 | Not Available | Negative | 3886283 - 3888148 | 66744.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


