Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | YT1_RS18830 | Not Available | Negative | 3855182 - 3855943 | 27266.7 |
| dna polymerase y family protein | YT1_RS18835 | Not Available | Negative | 3855953 - 3857521 | 55257.1 |
| hypothetical protein | YT1_RS18840 | Not Available | Negative | 3857518 - 3858303 | 26825.5 |
| serine/threonine-protein kinase | YT1_RS18845 | Not Available | Positive | 3858467 - 3859660 | 41716.8 |
| merr family transcriptional regulator | YT1_RS18850 | Not Available | Positive | 3859700 - 3860767 | 37572.0 |
| hypothetical protein | YT1_RS18855 | Not Available | Positive | 3860764 - 3861249 | 17200.1 |
| response regulator | YT1_RS18860 | Not Available | Negative | 3861257 - 3861919 | 23615.2 |
| atp-binding protein | YT1_RS18865 | Not Available | Negative | 3861916 - 3863190 | 45077.4 |
| pspc domain-containing protein | YT1_RS18870 | Not Available | Positive | 3863324 - 3864655 | 46481.8 |
| hypothetical protein | YT1_RS18875 | Not Available | Positive | 3864648 - 3864884 | 8251.19 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


