Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nuclear transport factor 2 family protein | YT1_RS02660 | Not Available | Negative | 350096 - 350527 | 15777.5 |
| iclr family transcriptional regulator | YT1_RS02665 | Not Available | Positive | 350623 - 351366 | 26230.7 |
| hypothetical protein | YT1_RS02670 | Not Available | Positive | 351599 - 351982 | 12928.3 |
| transposase | YT1_RS27795 | Not Available | Negative | 351936 - 352193 | 9251.53 |
| transposase | YT1_RS02680 | Not Available | Positive | 352234 - 352698 | 16921.7 |
| helix-turn-helix transcriptional regulator | YT1_RS02685 | Not Available | Negative | 352811 - 352989 | 6054.18 |
| helix-turn-helix transcriptional regulator | YT1_RS27580 | Not Available | Negative | 353059 - 353306 | 8479.93 |
| hsp70 family protein | YT1_RS02695 | Not Available | Negative | 353567 - 354931 | 47804.9 |
| hypothetical protein | YT1_RS02700 | Not Available | Negative | 355448 - 355969 | 19630.9 |
| helix-turn-helix transcriptional regulator | YT1_RS02705 | Not Available | Positive | 355962 - 356242 | 10397.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


