Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | YT1_RS18580 | Not Available | Positive | 3805112 - 3806302 | 42667.8 |
| abc transporter permease | YT1_RS18585 | Not Available | Positive | 3806299 - 3807093 | 27404.6 |
| glycine betaine abc transporter substrate-binding protein | YT1_RS18590 | Not Available | Positive | 3807090 - 3808067 | 34932.0 |
| dmt family transporter | YT1_RS18595 | Not Available | Negative | 3808093 - 3808407 | 11033.9 |
| hypothetical protein | YT1_RS18600 | Not Available | Positive | 3808606 - 3808944 | 11177.1 |
| c40 family peptidase | YT1_RS18605 | Not Available | Positive | 3808950 - 3809963 | 33829.9 |
| hypothetical protein | YT1_RS18610 | Not Available | Positive | 3810004 - 3810336 | 11989.1 |
| ybab/ebfc family nucleoid-associated protein | YT1_RS18615 | Not Available | Positive | 3810342 - 3810647 | 10362.3 |
| hypothetical protein | YT1_RS18620 | Not Available | Positive | 3810708 - 3811940 | 44785.8 |
| nad(p)/fad-dependent oxidoreductase | YT1_RS18625 | Not Available | Negative | 3811873 - 3813261 | 49994.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


