Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rho termination factor n-terminal domain-containing protein | YT1_RS18480 | Not Available | Negative | 3785065 - 3785322 | 9440.03 |
| helix-turn-helix transcriptional regulator | YT1_RS18485 | Not Available | Negative | 3785392 - 3785943 | 19614.9 |
| hypothetical protein | YT1_RS18490 | Not Available | Positive | 3786096 - 3786632 | 18661.3 |
| glycerol-3-phosphate dehydrogenase | YT1_RS18495 | Not Available | Negative | 3786694 - 3788427 | 63059.2 |
| glycerol kinase glpk | YT1_RS18500 | Not Available | Positive | 3788523 - 3790037 | 54838.6 |
| merr family transcriptional regulator | YT1_RS18505 | Not Available | Negative | 3790101 - 3790916 | 29451.0 |
| voc family protein | YT1_RS18510 | Not Available | Negative | 3790913 - 3791332 | 14799.6 |
| nad(p)h-quinone dehydrogenase | YT1_RS18515 | Not Available | Negative | 3791394 - 3792794 | 48781.9 |
| gamma-glutamylcyclotransferase | YT1_RS18520 | Not Available | Positive | 3792973 - 3793443 | 17277.3 |
| abc transporter atp-binding protein | YT1_RS18525 | Not Available | Negative | 3793440 - 3794498 | 36752.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


