Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-oxoacid:ferredoxin oxidoreductase subunit beta | YT1_RS02610 | Not Available | Positive | 339938 - 340771 | 30256.2 |
| duf2267 domain-containing protein | YT1_RS02615 | Not Available | Positive | 340786 - 341244 | 16187.4 |
| nadh-ubiquinone oxidoreductase-f iron-sulfur binding region domain-containing protein | YT1_RS02620 | Not Available | Positive | 341241 - 342605 | 49073.6 |
| prolipoprotein diacylglyceryl transferase family protein | YT1_RS02625 | Not Available | Negative | 342757 - 343740 | 34993.2 |
| hypothetical protein | YT1_RS27570 | Not Available | Negative | 344439 - 344651 | 7652.18 |
| nuclear transport factor 2 family protein | YT1_RS02635 | Not Available | Negative | 344940 - 345428 | 18805.0 |
| sdr family nad(p)-dependent oxidoreductase | YT1_RS02640 | Not Available | Negative | 345430 - 346209 | 27214.9 |
| mfs transporter | YT1_RS02645 | Not Available | Negative | 346229 - 347563 | 47054.6 |
| fad-dependent oxidoreductase | YT1_RS02650 | Not Available | Negative | 347609 - 349069 | 51473.8 |
| sdr family nad(p)-dependent oxidoreductase | YT1_RS02655 | Not Available | Negative | 349199 - 350038 | 29251.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


