Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphomannomutase/phosphoglucomutase | YT1_RS18230 | Not Available | Negative | 3736498 - 3737865 | 48039.9 |
| duf3499 domain-containing protein | YT1_RS18235 | Not Available | Negative | 3737938 - 3738333 | 13903.2 |
| metallopeptidase family protein | YT1_RS18240 | Not Available | Positive | 3738421 - 3738915 | 18314.0 |
| whib family transcriptional regulator | YT1_RS18245 | Not Available | Negative | 3738920 - 3739183 | 9851.56 |
| 2-phospho-l-lactate transferase | YT1_RS18250 | Not Available | Positive | 3739583 - 3740572 | 34662.5 |
| coenzyme f420-0:l-glutamate ligase | YT1_RS18255 | Not Available | Positive | 3740569 - 3741951 | 48695.1 |
| nudix hydrolase | YT1_RS18260 | Not Available | Positive | 3741953 - 3742516 | 20320.1 |
| sgnh/gdsl hydrolase family protein | YT1_RS18265 | Not Available | Negative | 3742513 - 3743268 | 28170.7 |
| sugar phosphate nucleotidyltransferase | YT1_RS18270 | Not Available | Negative | 3743284 - 3744369 | 37948.5 |
| glycosyltransferase family 2 protein | YT1_RS18275 | Not Available | Negative | 3744366 - 3745271 | 32796.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


